Job Description P06710 Confidence 99.15% Date Thu Jan 5 10:59:20 GMT 2012 Rank 98 Aligned Residues 146 % Identity 22% Template c2p5tD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:pezt; PDBTitle: molecular and structural characterization of the pezat chromosomal2 toxin-antitoxin system of the human pathogen streptococcus pneumoniae Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F
Query Conservation
Alig confidence														.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	Y	T	D	S	E	F	K	H	A	L	.	.	A	R	N	L	R	S	L	T	R	G	K	K	S	S	K	Q	P	I	A	I	L	L	G	G	Q	S	G	A	G	K	T	T	I	H	R	I	K	Q	K	E	F	Q	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T												.	.									T	T					S	S								S		T	T	S		T											T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.															.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	L	I	E	I	D	A	A	S	R	.	.	.	.	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H
Query Conservation													.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.										.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	I	V	I	I	D	G	D	S	F	R	S	Q	H	P	H	Y	L	E	L	Q	Q	E	Y	G	K	D	S	V	E	Y	T	K	D	F	A	G	K	M	V	E	S	L	V	T	K	L	S	S	L	G	Y	N	L	L	I	E	G	T	L	R	T	V	D	V	P	K	K	T	A	Q	L	L	K	N	K	G	Y	E
Template Known Secondary structure		.	.						G	G	G	G	G	G	G	S	T	T									T	T	T	T																							T									T	T	S	S												T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S	R	C	.	L	Q	F	H	L	K	A	L	D
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		V	Q	L	A	L	I	A	T	K	P	E	L	S	Y	L	S	T	L	I	R	Y	E	E	L	Y	I	I	N	P	N	Q
Template Known Secondary structure																														T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions