Job Description P06710 Confidence 96.73% Date Thu Jan 5 10:59:20 GMT 2012 Rank 338 Aligned Residues 111 % Identity 20% Template c2o8dB_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh6; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g du mispair Resolution 3.00 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.												.
Template Conservation																																											.	.	.	.	.	.	.												.
Template Sequence		A	Y	C	V	L	V	T	G	P	N	M	G	G	K	S	T	L	M	R	Q	A	G	L	L	A	V	M	A	Q	M	G	C	Y	V	P	A	E	V	C	R	L	.	.	.	.	.	.	.	T	P	I	D	R	V	F	T	R	L	G	.	S	T	F	F	V	E	L	S	E	T	A	S	I	L	M	H	A	T	A	H
Template Known Secondary structure								B			T	T	S	S																T	T	T			B	S	S	S					.	.	.	.	.	.	.				S	B							.																			T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.												.
Template SS confidence
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.								.	.	1170	.	.	.	.	.	.	.	.		.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	.	.	.	.	.	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q
Query Conservation																	.	.	.	.	.
Alig confidence			.	.	.												.	.	.	.	.														.
Template Conservation			.	.	.																														.
Template Sequence		S	.	.	.	L	V	L	V	D	E	L	G	R	G	T	A	T	F	D	G	T	A	I	A	N	A	V	V	K	E	L	A	E	.	T	I	K	C	R	T	L	F	S	T	H	Y	H	S
Template Known Secondary structure			.	.	.							S		T	T	S																			.	T	S
Template Predicted Secondary structure			.	.	.																														.
Template SS confidence
		1208				.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.		.	.	1240	.	.	.	.	.	.	.	.	.	1250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions