Job Description P06710 Confidence 96.44% Date Thu Jan 5 10:59:20 GMT 2012 Rank 373 Aligned Residues 111 % Identity 16% Template c2o8bA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:dna mismatch repair protein msh2; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g t mispair Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.												.
Template Conservation																																											.	.	.	.	.	.	.												.
Template Sequence		Q	M	F	H	I	I	T	G	P	N	M	G	G	K	S	T	Y	I	R	Q	T	G	V	I	V	L	M	A	Q	I	G	C	F	V	P	C	E	S	A	E	V	.	.	.	.	.	.	.	S	I	V	D	C	I	L	A	R	V	G	.	S	T	F	M	A	E	M	L	E	T	A	S	I	L	R	S	A	T	K	D
Template Known Secondary structure		S								S	T	T	S	S																	T	T			B	S	S	S					.	.	.	.	.	.	.				S								.															T	T			T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.												.
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.								.	.	.	.	.	.	.	710	.	.	.		.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	.	.	.	.	.	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q
Query Conservation																	.	.	.	.	.
Alig confidence			.	.	.												.	.	.	.	.														.
Template Conservation			.	.	.																														.
Template Sequence		S	.	.	.	L	I	I	I	D	E	L	G	R	G	T	S	T	Y	D	G	F	G	L	A	W	A	I	S	E	Y	I	A	T	.	K	I	G	A	F	C	M	F	A	T	H	F	H	E
Template Known Secondary structure		S	.	.	.						S				S	S																			.	T	T											T	T
Template Predicted Secondary structure			.	.	.																														.
Template SS confidence
		743				.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.		.	.	.	.	.	.	.	780	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions