Job Description P06710 Confidence 99.36% Date Thu Jan 5 10:59:20 GMT 2012 Rank 92 Aligned Residues 140 % Identity 18% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		M	S	Y	Q	V	L	A	R	K	W	R	.	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C
Query Conservation													.
Alig confidence													.													.	.															.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.															.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	H	H	H	H	H	H	S	H	M	D	Y	P	S	F	D	K	F	L	G	T	E	N	.	.	A	E	L	V	Y	V	L	R	H	K	H	G	Q	F	.	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																						S			T	.	.													S		.					S	S	S	T	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.															.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	.	.	P	P	E	H	V	K	F	L	L	A	T	T
Query Conservation																																																																				.	.
Alig confidence		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	P	L	T	D	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	Y	L	A	V	D	Q	V	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	F	R	N	S	G	K	G	F	L	L	L	G	S	E
Template Known Secondary structure		.	.	.	.	.	T	T	T								T	T	T	S				G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G		S						S	T	T				S																	T									S
Template Predicted Secondary structure		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.														.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		158	.	160	.				.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.									.	.	.
Query SS confidence						.	.	.									.	.	.
Query Sequence		D	P	Q	K	.	.	.	L	P	V	T	I	L	S	R	.	.	.	C	L	Q	F	H	L	K	A
Query Conservation						.	.	.									.	.	.
Alig confidence						.	.	.									.	.	.
Template Conservation
Template Sequence		Y	T	P	Q	Q	L	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V	K	P
Template Known Secondary structure		S		T	T	T	S	S									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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