Job Description P06710 Confidence 96.16% Date Thu Jan 5 10:59:20 GMT 2012 Rank 409 Aligned Residues 144 % Identity 17% Template c2kbeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dbp5; PDBTitle: solution structure of amino-terminal domain of dbp5p Resolution UNK

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence		W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																		.
Template Conservation																																															.
Template Sequence		Y	S	A	K	S	F	D	E	L	G	L	A	P	E	L	L	K	G	I	Y	A	M	K	F	Q	K	P	S	K	I	Q	E	R	A	L	P	L	L	L	H	N	P	P	R	N	.	M	I	A	Q	S	Q	S	G	T	G	K	T	A	A	F	S	L	T	M	L	T	R	V	N	P	E	D	A	S	P	Q	A	I	C
Template Known Secondary structure						S					S	S											S	S	S	S				S									S	S			S	S			.					S	S	T	T																		T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
											74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		.	.	.	.	.	.	.	.	.	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	.	.	.	.	.	.	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	.
Query Conservation		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.									.	.																						.
Template Conservation																																																										.	.
Template Sequence		L	A	P	S	R	E	L	A	R	Q	T	L	E	V	V	Q	E	M	G	K	F	T	K	I	T	S	Q	L	I	V	P	D	S	F	E	K	N	K	Q	I	N	A	Q	V	I	V	G	T	P	G	T	V	L	D	L	M	.	.	R	R	K	L	M	Q	L	Q	K	I	K	I	F	V	L	D	E	A	D	N	M	L
Template Known Secondary structure				S	S															S	T	T		S							S	T	T		S			S	S					S						T	T	T						.	.		T	T	S			T	T	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
			132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		D	Q	Q	G	L	G	D	Q	C	I	R	V	K	R	F	L	P	K	D	T	Q	L	V	L	F	S
Template Known Secondary structure			S	T	T												T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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