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Job DescriptionP06710
Confidence96.29%DateThu Jan 5 10:59:20 GMT 2012
Rank395Aligned Residues118
% Identity16%Templatec2hydB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60. ........70....
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Query Sequence  YLFSGTRGVGKTSIARLLAKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LNCETGITATPCG
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Template Sequence  VAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVE
Template Known Secondary structure 
STTSSTTTTTSS

STTGGGS
T
SS



SSBGGG
SS

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   370.........380.........390.........400.........410.........420.........430.........440.........
 
   75.... 80.........90.........100.........110.........120........ .130.........140........
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Query Sequence  VCDNC. . . . . REIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEV. HMLSRHSFNALLKTLEEPPE
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Template Sequence  AAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLN. . . . NPPILILDEATSALDLESESIIQEALDVLSK
Template Known Secondary structure  TT
TSTTGGG
B

GGGTTS
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SSTTTT

TT
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   450.........460.........470.........480.........490.... .....500.........510.........520.....
 
   149150.........160..
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Query Sequence  HVKFLLATTDPQKL
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Template Sequence  DRTTLIVAHRLSTI
Template Known Secondary structure  TS
SSGGGT
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   526...530.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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