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Job DescriptionP06710
Confidence98.57%DateThu Jan 5 10:59:20 GMT 2012
Rank110Aligned Residues119
% Identity17%Templatec2gxaA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVED
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Template Sequence  FINALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGGS. . . . . . . . . . . . . . . . . . . . . . . . VLSFANHKSH. . . .
Template Known Secondary structure  TT
TT


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   412.......420.........430.........440.........450... ......460...
 
   104.....110.........120.........130.........140... ......150.........160......
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Query Sequence  TRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTL. . . . . . . . . . . . . . . EEPPEHVKFLLATTDPQKLPVTI. .
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Template Sequence  . . . . . . . FWLASLADTR. AALVDDATHACWRYFDTYLRNALDGYPVSIDRKHKAAVQIKAPPLLVTSNIDVQAEDRYLYL
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TTSGGGT
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   464.....470... ......480.........490.........500.........510.........520.........530.....
 
   167..170........
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Query Sequence  LSRCLQFHLKAL
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Template Sequence  HSRVQTFRFEQP
Template Known Secondary structure  TT


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   536...540.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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