Job Description P06710 Confidence 94.22% Date Thu Jan 5 10:59:20 GMT 2012 Rank 496 Aligned Residues 120 % Identity 13% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.																					.
Query SS confidence																																																						.	.	.	.	.	.	.																					.
Query Sequence		L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	.	.	.	.	.	.	.	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	.
Query Conservation																																																						.	.	.	.	.	.	.																					.
Alig confidence																																																						.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		I	S	Q	W	R	E	W	I	D	E	K	L	Y	Q	P	S	I	I	I	A	G	P	Q	N	S	G	K	T	S	L	L	T	L	L	T	A	D	Y	D	G	S	G	V	T	L	V	D	F	P	G	H	V	K	L	R	Y	K	L	S	D	Y	L	K	T	R	A	K	F	V	K	G	L	I	F	M	V	D	S	T	V
Template Known Secondary structure																								T	T	S	S															T	T		S				T	T	T					S											G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	.	.	.	.	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		D	P	K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T	A	R	P	P	S	K	I	K	D	A	L	E
Template Known Secondary structure																								S	T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions