Return to main results Retrieve Phyre Job Id

Job DescriptionP06710
Confidence95.82%DateThu Jan 5 10:59:20 GMT 2012
Rank433Aligned Residues86
% Identity28%Templatec2d7dA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:uvrabc system protein b; PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  GQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRT
Query Conservation 
       
             
  

 
 



 
   
  
                                     
Alig confidence 
















.

.
























........................









Template Conservation   
  

  
        .  .  
   

 


  
   
      ........................ 


 
   
Template Sequence  DQPKAIEKLVKGIQEGK. KH. QTLLGATGTGKTFTVSNLIKEVNKP. . . . . . . . . . . . . . . . . . . . . . . . TLVIAHNKTL
Template Known Secondary structure  TTT
.S.
TTS



........................
SS
Template Predicted Secondary structure 


.

.









........................


Template SS confidence 















































































   16...20.........30.. .. .....40.........50......... 60.........
 
   100......... 110.........120.........130.
Predicted Secondary structure 
............................................









Query SS confidence 









. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





















Query Sequence  KVEDTRDLLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NVQYAPARGRFKVYLIDEVHML
Query Conservation       
    ............................................            
 



   
Alig confidence 









............................................





















Template Conservation    

  

        
                                                  


 
   
Template Sequence  AGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCI
Template Known Secondary structure 
TTS




TTTT



S

GGGG
Template Predicted Secondary structure 






























Template SS confidence 











































































   70.........80.........90.........100.........110.........120.........130.........140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions