Job Description P06710 Confidence 97.18% Date Thu Jan 5 10:59:20 GMT 2012 Rank 272 Aligned Residues 123 % Identity 14% Template c1ymfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp Resolution 2.60 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																			.																																												.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																												.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	.	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	.	.	.	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N
Query Conservation																			.																																												.	.	.	.	.	.	.	.	.
Alig confidence																			.																																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	L	D	F	H	P	G	A	G	K	T	R	R	F	L	P	Q	I	L	A	E	C	A	R	R	R	L	R	T	L	V	L	A	P	T	R	V	V	L	S	E	X	K	E	A	F	H	G	L	D	V	K	F	H	T	Q	A	F	S	A	H	G	S	G	R	E	V	I	D	A	X	C	H	A	T	L	T	Y	R
Template Known Secondary structure								T	T	S		T	T	T	T													T								S	S												T	T	S						S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	.	.	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q	K	L	P
Query Conservation																													.	.
Alig confidence																													.	.
Template Conservation
Template Sequence		X	L	E	P	T	R	V	V	N	W	E	V	I	I	X	D	E	A	H	F	L	D	P	A	S	I	A	A	R	G	W	A	A	H	R	A	R	A	N	E	S	A	T	I	L	X	T	A	T	P	P	G	T	S	D
Template Known Secondary structure				S	S							S					T	T	T	T			S																T	T	S								S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions