Return to main results Retrieve Phyre Job Id

Job DescriptionP06710
Confidence97.47%DateThu Jan 5 10:59:20 GMT 2012
Rank214Aligned Residues146
% Identity13%Templatec1t4gA_
PDB info PDB header:recombinationChain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110....... .
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Query Sequence  YLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR. . G
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Template Sequence  TEFAGVFGSGKTQIMHQSCVNL. . . . . QNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIMQMAEHAGIDGQTVLD
Template Known Secondary structure  STTSST.....T
GGG

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   101........110.........120.. .......130.........140.........150.........160.........170.....
 
   119120.........130.........140.........150.........160.. .......170.........180.........190....
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Query Sequence  RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKL. . . . PVTILSRCLQFHLKALDVEQIRHQLEHILNEE
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Template Sequence  NTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKL. . . . . . . GRHMATLNKLADLF
Template Known Secondary structure  T
SSTTT

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   176...180.........190.........200.........210.........220.........230.... .....240........
 
   195...
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Query Sequence  HIAH
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Template Sequence  NCVV
Template Known Secondary structure  T
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   249250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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