Job Description P06710 Confidence 100.00% Date Thu Jan 5 10:59:20 GMT 2012 Rank 4 Aligned Residues 310 % Identity 26% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Y	Q	V	L	A	R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R
Query Conservation
Alig confidence																																									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	E	K	P	W	V	E	K	Y	R	P	Q	R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	H	.	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S	S		G	G	G	T	S				S	G	G	G			S													T	T	T					.					S		T	T	S	S	T	T												G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	.	.	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D
Query Conservation																																	.	.
Alig confidence		.	.	.	.																												.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	S	N	V	R	F	I	L	S	C	N	Y
Template Known Secondary structure		.	.	.	.	G										T	T	T	S	S													T	T	S			S	S	S		S								T	G	G	G	S															T	T	T	T								S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	K	L	P	V	T	I	L	S	R	C	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	A	E	G	S	L	R	D	A	L	S	L	T	D	Q	A	I	A	S	G	D	G	Q	V	S	T	Q	A	V	S
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	E	G	D	M	R	R	A	I	N	I	L	.	Q	A	A	A	A	L	D	K	K	I	T	D	E	N	V	F
Template Known Secondary structure		G	G	G	S						T	T																										T																T	T										.					T	T		S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	M	L	G	T	L	D	D	D	Q	A	L	S	L	V	E	A	M	V	E	A	N	G	E	R	V	M	A	L	I	N	E	A	A	.	A	R	G	I	E	W	E	A	L	L	V	E	M	L	G	L	L	H	R	I	A	M	V	Q	L	S	P	A	A	L	G	N	D	M	A	A	I	E	L	R	M	R	E	L	A
Query Conservation																																				.
Alig confidence																																				.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	A	S	R	A	R	P	E	D	I	R	E	M	M	L	L	A	L	K	G	N	F	L	K	A	R	E	K	L	R	E	I	L	L	K	Q	G	L	S	G	E	D	V	L	V	Q	M	H	K	E	V	F	N	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T																	T																T															G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	I	P	P	T	D	I	Q	L	Y	Y	Q	T	L	L	I	G	R	K	E	L	P	Y	A	P	D	R	R	M	G	V	E	M	T	L	L	R	A	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	I	E	E	P	K	K	V	L	L	A	D	K	I	G	E	Y	N	F	R	L	V	E	G	A	N	E	I	I	Q	L	E	A	L	L	A	Q	F	T
Template Known Secondary structure		.	.
Template Predicted Secondary structure		.	.
Template SS confidence
				285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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