Job Description P06710 Confidence 99.79% Date Thu Jan 5 10:59:20 GMT 2012 Rank 71 Aligned Residues 286 % Identity 13% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		Q	V	L	A	R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	.	.	.	.	.	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N
Query Conservation																																.	.	.	.	.
Alig confidence													.	.	.																	.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		S	V	F	S	P	S	Y	V	P	K	R	.	.	.	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y
Template Known Secondary structure		G	G	G	S	T	T				S		.	.	.		T	T																		S		B	S	S										T	T	S	S													T	T	S										T	T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	.	.	.	.	E	H	V	K	F	L	L
Query Conservation																																																																							.	.	.	.
Alig confidence																																																																							.	.	.	.
Template Conservation
Template Sequence		R	N	F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	K	L	G	A	F	R	I	A	L	V	I
Template Known Secondary structure			S													T					S	S																		T	T									T	G	G	G	S												T	T						S	S	B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		155	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.										.	.	.	.	.	.
Predicted Secondary structure						.	.	.													.	.																								.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.													.	.																								.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		A	T	T	D	.	.	.	P	Q	K	L	P	V	T	I	L	S	R	C	.	.	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	.	.	E	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	A	E	G	.	.	.	.	.	.	.	.	.	S	L	R	D	A	L
Query Conservation						.	.	.													.	.																								.	.																				.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.													.	.																								.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	H	N	D	A	V	L	N	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G	A	Q	T	P	L	D	T	N	R	G	D	A	R	L	A	I
Template Known Secondary structure				S	S	T					T	S									T	T									B																B		T	T	S	S													S	B	S	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		219	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		S	L	T	D	Q	A	I	A	S	.	.	.	.	G	D	G	Q	V	S	T	Q	A	V	S	A	M	L	G	T	L	D	D	D	Q	A	L	S	L	V	E	A	M	V	E	A	N	G	E	R	V	M	A	L	I	N	E	A	A	A	R	G	I	E	W	E	A	L	L	V	E	M	L	G	L	L	H	R	I	A
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																													.
Template Conservation																																											.
Template Sequence		D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E	V	L	F	G	I	S	E	E	V	L	I	G	.	L	P	L	H	E	K	L	F	L	L	A	I	V	R	S	L	K	I	S	H	T	P	Y	I	T	F	G	D	A	E	E	S	Y	K	I	V	C
Template Known Secondary structure														T	T		S	S														S										T	.	S																				S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions