Return to main results Retrieve Phyre Job Id

Job DescriptionP04846
Confidence98.15%DateThu Jan 5 10:58:24 GMT 2012
Rank126Aligned Residues210
% Identity11%Templated2ozza1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50........ .60.........70.........80.........90.........100.........110....
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Query Sequence  VGVINGAEQDVAEVAKKVAKEKY. GLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFP
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Template Sequence  VCAXPLPYTRLYEGLASGLKAQFDGIPFYYAHXRGADIRVECLLNGVYDXAVVSRLAAESYLSQN. NLCIALELGPHT. .
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   16...20.........30.........40.........50.........60.........70.........80 .........90..
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  MAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDD
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Template Sequence  YVGEHQLICRKGESGNVKRVGLDSRSADQKIXTDVFFGD. . . . . . . . . . . . . . . . . . . . . . SDVERVDLSYHESLQRIVK
Template Known Secondary structure  SS

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   93......100.........110.........120.........130. ........140.........150
 
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Query Sequence  PKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFL. QSYQSPEVAKAAETIFNGGAVPGW
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Template Sequence  GDVDAVIWNVAENELT. . XLGLEATPLTDDPRFLQATEAVVLTRVDDYPXQQLLRAVVDKHALLAHQQRVVSGEQEPSY
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   151........160...... ...170.........180.........190.........200.........210.........220.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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