Job Description P04846 Confidence 99.54% Date Thu Jan 5 10:58:24 GMT 2012 Rank 27 Aligned Residues 206 % Identity 13% Template d2nxoa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.04

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		K	H	I	K	V	G	V	I	N	G	A	E	Q	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	.	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V	G	N	T
Query Conservation																																									.
Alig confidence																				.	.	.	.																		.
Template Conservation																				.	.	.	.
Template Sequence		T	R	P	R	V	G	H	I	Q	F	L	N	C	L	P	L	Y	W	.	.	.	.	G	L	A	R	T	G	T	L	L	D	F	E	L	T	K	D	T	P	E	K	L	S	E	Q	L	V	R	G	D	L	D	I	G	P	V	T	L	V	E	F	L	K	N	A	D	D	L	V	A	F	P	D	I	A	V	G	C	D
Template Known Secondary structure											S	G	G	G						.	.	.	.					T	S	G	G	G	G																	T	T	S		S												T	G	G	G												S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	L	Q	K	E	K	L	I	T	L	K	E	G	K	G	L	L	P	T	A	L	D	I	T	D	N	P	R	H	L	Q	I	M	E	L	E	G	A	Q	L	P	R
Query Conservation
Alig confidence													.								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	V	M	S	C	V	I	V	S	Q	.	V	P	L	D	R	L	D	.	G	A	R	V	A	L	G	S	T	S	R	T	S	V	R	L	A	Q	L	L	L	S	E	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	Q	P	D	Y	Y	T	C	P	P	D	L	S	L	M	A
Template Known Secondary structure		S			S	S						S	.	S		T	T	S		S	.	S	S						T	T		S													T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S
Template Predicted Secondary structure													.								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		V	L	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	V	H	D	S	V	F	I	E	D	K	N	S	P	Y	V	N	I	L	V	A	R	E	D	.	.	.	N	K	N	A	E	N	V	K	E	F	L	Q	S	Y	Q	S	P	E	V	A	K	A	A	E	T	I
Query Conservation																																																	.	.	.
Alig confidence																																																	.	.	.																.	.
Template Conservation																																																																			.	.
Template Sequence		A	V	L	I	G	D	A	A	L	R	A	N	M	I	D	G	P	R	Y	G	L	D	V	H	D	L	G	A	L	W	K	E	W	T	G	L	P	F	V	F	A	V	W	A	A	R	R	D	Y	A	E	R	E	P	V	I	T	R	K	V	H	E	A	F	L	.	.	A	S	R	N	L	S	L	E	E
Template Known Secondary structure															T					T	T															S																															.	.									T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions