Return to main results Retrieve Phyre Job Id

Job DescriptionP04846
Confidence92.88%DateThu Jan 5 10:58:24 GMT 2012
Rank193Aligned Residues203
% Identity11%Templated2esna2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50........ .60.........70.........80.........90.........100......
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Query Sequence  SSDAKHIKVGVINGAEQDVAEVAKKVAKEKY. GLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVA
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Template Sequence  GQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLV. NAERKLSVEALASGRIDFALGYDEEHERLPEGIQAHDWFA
Template Known Secondary structure  TT




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   95....100.........110.........120.........130... ......140.........150.........160.........170...
 
   107..110...... ...120.........130.........140.........150.........160.........170.........180.....
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Query Sequence  VGNTFVFPMA. GYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEG
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Template Sequence  DRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGL. . . . . . . . . . . . . . . . . . . RREVAVQLPTV
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   174.....180.........190.........200.........210.........220... ......230....
 
   186...190.........200.........210.........220.........230.........240.........250...
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Query Sequence  AQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQS
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Template Sequence  LAALFLAGSTD. FLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQ. . GRDAHAWMIGQLKG
Template Known Secondary structure  TSS.
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   235....240..... ....250.........260.........270.........280..... ....290.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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