Return to main results Retrieve Phyre Job Id

Job DescriptionP04846
Confidence98.71%DateThu Jan 5 10:58:24 GMT 2012
Rank73Aligned Residues201
% Identity7%Templated2a5sa1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60......... 70.........80.........90.........100.........110.....
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Query Sequence  VAEVAKKVAKEKYGLDVELVGFSG. . . . . . . . . . SLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPM
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Template Sequence  FCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTIN. EERSEVVDFSVPFVETGISVMV
Template Known Secondary structure  T



SSSS

TT
TTS
S
SS
B

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   62.......70.........80.........90.........100.........110........ .120.........130.........140
 
   116...120.........130 .........140.........150.........160.........170.........180.........190
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Query Sequence  AGYSKKIKTVAQIKE. . . . . GATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPR
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Template Sequence  SRQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTRFNQR. . . . . . . . . . . . . . . . . . . . GVEDALV
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STTSSGGGSSS




TTSTT
GGG

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   141........150.........160.........170.........180.........190... ......200
 
   191........200.........210... ......220.........230.........240.........250.... .....260......
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Query Sequence  VLDDPKVDVAIISTTYIQQTGLS. . . PVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSP. EVAKAAETIFNG
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Template Sequence  SLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTG
Template Known Secondary structure  TTS
ST
TTS



GGG


TT
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   203......210.........220.........230.........240.........250.........260.........270.........280..
 
   267
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Query Sequence  G
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Template Sequence  I
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   283
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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