Return to main results Retrieve Phyre Job Id

Job DescriptionP04846
Confidence96.96%DateThu Jan 5 10:58:24 GMT 2012
Rank167Aligned Residues195
% Identity16%Templated1pdaa1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.76

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50........ .60.........70 .........80.........90........
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Query Sequence  AKHIKVGVINGAEQDVAEVAKKVAKEKY. . GLDVELVGFSGS. . . . . . . . . . LLPNDATNHGELDANVFQHRPFLEQDNQ
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Template Sequence  DNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVIGKGLFVKELEVALLENRADIAV. . HSMKDVPVEF
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   3......10.........20.........30.........40.........50.........60.........70 .........80
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  AHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHL
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Template Sequence  PQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERR. . . . . . . . . . . . . . . . . . . . . . . . PDLII
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   90.........100.........110.........120.........130.........140 .....
 
   179180.........190.........200.........210.........220.........230 .........240.........250.
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Query Sequence  QIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVN. ILVAREDNKNAENVKEFLQSY
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Template Sequence  RSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAAL
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   146...150.........160.........170.........180.........190.........200.........210.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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