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Job Description | P04846 | Confidence | 51.78% | Date | Thu Jan 5 10:58:24 GMT 2012 |
Rank | 211 | Aligned Residues | 116 |
% Identity | 13% | Template | d1jnfa2 |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Transferrin
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Resolution | 2.60 |
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28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | S | D | A | K | H | I | K | V | G | V | I | N | G | A | E | Q | D | V | A | E | V | A | K | K | V | A | K | E | K | Y | G | L | D | V | E | L | V | G | F | S | G | S | L | L | P | N | D | A | T | N | H | G | E | L | D | A | N | V | F | Q | H | R | P | F | L | E | Q | D | N | Q | A | H | G | Y | K | L | V | A | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | D | E | C | K | A | V | K | W | C | A | L | G | H | H | E | R | L | K | C | D | E | W | S | V | T | S | . |
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G | G | L | I | E | C | E | S | A | E | T | P | E | D | C | I | A | K | I | M | N | G | E | A | D | A | M | S | L | D | G | G | Y | V | Y | I | A | G | Q | . |
C | G | L | V | P | V | L | A | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | |
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. | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | N | . |
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T | F | V | F | P | M | A | G | Y | S | K | K | I | K | T | V | A | Q | I | K | E | G | A | T | V | A | I | P | N | D | P | T | N | L | G | R | A | L | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | Y | E | S | T | D | C | K | K | A | P | E | E | G | Y | L | S | V | A | V | V | K | K | S | N | P | D | I | N | W | N | N | L | E | . |
G | K | K | S | C | H | T | A | V | D | R | T | A | G | W | N | I | P | M |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
411 | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | |
. | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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