Job Description P04846 Confidence 51.78% Date Thu Jan 5 10:58:24 GMT 2012 Rank 211 Aligned Residues 116 % Identity 13% Template d1jnfa2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.60

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	A	K	H	I	K	V	G	V	I	N	G	A	E	Q	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V
Query Conservation
Alig confidence																													.	.	.	.																																								.
Template Conservation																													.	.	.	.																																								.
Template Sequence		Q	D	E	C	K	A	V	K	W	C	A	L	G	H	H	E	R	L	K	C	D	E	W	S	V	T	S	.	.	.	.	G	G	L	I	E	C	E	S	A	E	T	P	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	Y	V	Y	I	A	G	Q	.	C	G	L	V	P	V	L	A	E
Template Known Secondary structure					T	T								T															.	.	.	.	T	S	S							S	S										T	T	S			B														.	T	T
Template Predicted Secondary structure																													.	.	.	.																																								.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410
		108	.													110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	.	.	.	.	.	.	.	.	.	.	.	.	T	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																				.
Template Sequence		N	Y	E	S	T	D	C	K	K	A	P	E	E	G	Y	L	S	V	A	V	V	K	K	S	N	P	D	I	N	W	N	N	L	E	.	G	K	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M
Template Known Secondary structure				S		S		T	T	S				S										S	S			S			G	G	G		T	.	T	S					S		T	T		T	T	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions