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Job Description | P04846 | Confidence | 97.12% | Date | Thu Jan 5 10:58:24 GMT 2012 |
Rank | 159 | Aligned Residues | 118 |
% Identity | 14% | Template | d1h76a1 |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Transferrin
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Resolution | 2.15 |
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31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | K | H | I | K | V | G | V | I | N | G | A | E | Q | D | V | A | E | V | A | K | K | V | A | K | E | K | Y | G | L | D | V | E | L | . |
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V | G | F | S | G | S | L | L | P | N | D | A | T | N | H | G | E | L | D | A | N | V | F | Q | H | R | P | F | L | E | Q | D | N | Q | A | H | G | Y | K | L | V | A | V | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | K | T | V | R | W | C | T | I | S | N | Q | E | A | N | K | C | S | S | F | R | E | N | M | S | K | A | V | K | N | G | P | L | V | S | C | V | K | K | S | S | Y | L | D | C | I | K | A | I | R | D | K | E | A | D | A | V | T | L | D | A | G | L | V | F | E | A | G | L | A | P | Y | N | L | K | P | V | V | A | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
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109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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N | T | F | V | F | P | M | A | G | Y | S | K | K | I | K | T | V | A | Q | I | K | E | G | A | T | V | A | I | P | N | D | P | T | N | L | G | R | A | L | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | Y | G | Q | K | D | N | P | Q | T | H | Y | Y | A | V | A | V | V | K | K | G | S | N | F | Q | W | N | Q | L | Q | . |
G | K | R | S | C | H | T | G | L | G | R | S | A | G | W | I | I | P | M |
Template Known Secondary structure |   |
 | B | S |
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| B | S |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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