Job Description P04846 Confidence 97.85% Date Thu Jan 5 10:58:24 GMT 2012 Rank 138 Aligned Residues 120 % Identity 13% Template d1dtza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	K	H	I	K	V	G	V	I	N	G	A	E	Q	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	K	K	S	V	R	W	C	T	T	S	P	A	E	S	K	K	C	A	Q	W	Q	R	R	M	K	K	V	R	G	P	S	V	T	C	V	K	K	T	S	R	F	E	C	I	Q	A	I	S	T	E	K	A	D	A	V	T	L	D	G	G	L	V	Y	D	A	G	L	D	P	Y	K	L	R	P	I	A	A	E
Template Known Secondary structure					S	S						S	S																T	T	T										S	S										T	T	S			B													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		109	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		N	T	.	.	.	.	.	.	.	.	.	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																				.
Template Conservation																																.
Template Sequence		V	Y	G	T	E	N	Q	P	Q	T	H	Y	Y	A	V	A	I	A	K	K	G	T	N	F	Q	L	N	Q	L	Q	.	G	L	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	M
Template Known Secondary structure			B	S		S	S	S		B	S										S	S					G	G	G		T	.	T						S		T	T		T	T	T	T
Template Predicted Secondary structure																																.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions