Job Description P04846 Confidence 75.78% Date Thu Jan 5 10:58:24 GMT 2012 Rank 202 Aligned Residues 120 % Identity 13% Template d1dota1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.35

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	A	K	H	I	K	V	G	V	I	N	G	A	E	Q	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		A	P	P	K	T	T	V	R	W	C	T	I	S	S	A	E	E	K	K	C	N	S	L	.	K	D	H	M	Q	Q	E	R	V	T	L	S	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	S	N	N	E	A	D	A	I	S	L	D	G	G	Q	V	F	E	A	G	L	A	P	Y	K	L	K	P	I	A	A
Template Known Secondary structure													S	S	T	T									.	T	T	T	T	T	T	S	S	S								S	S										T	T	T			B												T	S	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		108	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		G	N	.	.	.	.	.	.	.	.	.	T	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																					.
Template Conservation																																	.
Template Sequence		E	V	Y	E	R	S	G	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K	G	T	D	F	M	I	K	D	L	R	.	G	K	T	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I
Template Known Secondary structure						S	S	S				S										T	T					G	G	G		T	.	T						S		S	S		T	T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions