Return to main results Retrieve Phyre Job Id

Job DescriptionP04846
Confidence83.52%DateThu Jan 5 10:58:24 GMT 2012
Rank200Aligned Residues96
% Identity14%Templated1cb6a2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100......... 110..
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Query Sequence  KVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGN. . . . . . . . . . . . . . . . . . . TFV
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Template Sequence  NQWSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDGGYVYTAGK. CGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLA
Template Known Secondary structure  TTTSSSTS

B
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SSSS



TTGGGS



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   13591360.........1370.........1380.........1390.........1400.... .....1410.........1420.........1430.......
 
   113......120.........130.........140.........
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Query Sequence  FPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLL
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Template Sequence  VAVVRRSDTSLTWNSVK. GKKSCHTAVDRTAGWNIPM
Template Known Secondary structure  SS
TT

GGG
T.TSS
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   1438.1440.........1450.... .....1460.........1470...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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