Job Description P04846 Confidence 65.77% Date Thu Jan 5 10:58:24 GMT 2012 Rank 206 Aligned Residues 96 % Identity 14% Template d1b1xa2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.62

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																		110	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	V	F	P
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		K	Q	W	S	D	V	S	N	R	K	V	A	C	A	S	A	S	T	T	E	E	C	I	A	L	V	L	K	G	E	A	D	A	L	N	L	D	G	G	F	I	Y	V	A	G	.	K	C	G	L	V	P	V	L	A	E	N	Q	K	S	Q	N	S	N	A	P	D	C	V	H	R	P	P	E	G	Y	L	A	V	A
Template Known Secondary structure								T	T	S	S							S	S											T	S			B													.		T	T										S		S	S			S	G	G	G	G	G	S
Template Predicted Secondary structure																																															.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		V	V	R	K	S	D	A	D	L	T	W	N	S	L	S	.	G	K	K	S	C	H	T	G	V	G	R	T	A	A	W	N	I	P	M
Template Known Secondary structure					S	S			S			G	G	G		T	.	T						S		T	T		T	T	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions