Job Description P04846 Confidence 99.67% Date Thu Jan 5 10:58:24 GMT 2012 Rank 23 Aligned Residues 224 % Identity 17% Template c3n5lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter; PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution Resolution 1.97 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		D	A	K	H	I	K	V	G	V	I	N	G	A	E	Q	.	.	.	.	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		D	Q	P	V	I	N	F	G	I	I	S	T	E	S	S	Q	N	L	K	S	I	W	E	P	F	L	K	D	X	S	Q	Q	T	G	Y	Q	V	K	A	F	F	A	P	D	Y	A	G	I	I	Q	G	X	R	F	D	K	V	D	I	A	W	Y	G	N	K	A	A	X	E	A	V	D	R	A	H	G	E	I	F	A
Template Known Secondary structure													S	S																					S	S								S	S										T	T	S		S																S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		106	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																	.	.	.	.																							.	.
Query SS confidence								.	.	.	.	.	.																	.	.	.	.																							.	.
Query Sequence		A	V	G	N	T	F	.	.	.	.	.	.	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	.	.	.	.	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	.	.	L	Q	K	E	K	L	I	T	L	K	E	G	K	G	L	L	P	T	A	L	D	I	T	D
Query Conservation								.	.	.	.	.	.																	.	.	.	.																							.	.
Alig confidence								.	.	.	.	.	.																	.	.	.	.																							.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	V	A	A	S	G	A	P	G	Y	W	S	L	L	I	A	N	K	D	S	K	I	D	S	L	E	D	X	L	A	N	A	K	S	L	T	F	G	N	G	D	P	N	S	T	S	G	Y	L	V	P	G	Y	Y	V	F	A	K	N	N	V	D	P	V	K	A	F	K	R	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T			S										T	T		S			S							T	G	G	G								T	T		T	T	T	T							T	T	T	T	T	T							S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		N	P	R	H	L	Q	I	M	E	L	E	G	A	Q	L	P	R	V	L	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	.	.	.	.	V	H	D	S	V	F	I	E	D	K	N	S	P	Y	V	N	I	L	V	A	R	E	D	N	K	N	A	E	N	V	K	E	F	L	Q
Query Conservation																																											.	.	.	.
Alig confidence		.	.	.	.	.	.																																				.	.	.	.																							.	.
Template Conservation		.	.	.	.	.	.																																																														.	.
Template Sequence		.	.	.	.	.	.	T	L	N	S	S	H	E	V	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	F	N	T	E	G	X	E	R	L	E	L	T	Q	P	E	K	A	R	Q	L	K	V	I	W	K	S	P	L	I	P	G	D	P	L	V	W	R	N	N	.	.	L	S	D	E	Q	K	N	K	L	R	D
Template Known Secondary structure		.	.	.	.	.	.															T	T	S	S	S																					T	T																			T	T	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.																																																														.	.
Template SS confidence
								176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.
		250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		S	Y	.	.	.	.	Q	S	P	E	V	A	K	A	A	E	T	I	F	N	G	G	A	V	P	G
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		F	F	F	K	Y	G	A	N	A	E	Q	K	K	V	L	A	D	L	Q	W	S	K	F	Q	A	S
Template Known Secondary structure									S										T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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