Job Description P04846 Confidence 96.44% Date Thu Jan 5 10:58:24 GMT 2012 Rank 173 Aligned Residues 211 % Identity 16% Template c3eq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution Resolution 2.80 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		K	H	I	K	V	G	V	I	N	G	A	E	Q	.	.	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V	G	N
Query Conservation															.	.
Alig confidence															.	.																									.	.																	.	.
Template Conservation																																									.	.																	.	.
Template Sequence		R	V	I	R	V	G	T	R	K	S	Q	L	A	R	I	Q	T	D	S	V	V	A	T	L	K	A	S	Y	P	G	L	Q	F	E	I	I	A	F	T	.	.	K	E	L	E	H	A	L	E	K	N	E	V	D	L	V	V	.	.	H	S	L	K	D	L	P	T	V	L	P	P	G	F	T	I	G	A	I	C	K
Template Known Secondary structure										S	S																		S	T	T										.	.									T	T	S		S				.	.			G	G	G	S		S	S			T	T
Template Predicted Secondary structure																																									.	.																	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		T	F	V	F	P	M	A	G	Y	S	K	.	.	.	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	L	Q	K	E	K	L	I	T	L	K	E	G	K	G	L	L	P	T	A	L	D	I	T	D	N	P	R	H	L	Q	I	M	E	L	E	G	A
Query Conservation													.	.	.
Alig confidence													.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	N	P	H	D	A	V	V	F	H	P	K	F	V	G	K	T	L	E	T	L	P	E	K	S	V	V	G	T	S	S	L	R	R	A	A	Q	L	Q	R	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	L	E	F	R	S	I	Q	G	N	L	N
Template Known Secondary structure													G	G	G	T	T			G	G	G	S		T	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S							S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																									.	160	.	.	.	.	.	.	.	.	.	170	.
		187	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.								.
Predicted Secondary structure								.																																						.																												.	.	.	.	.	.	.
Query SS confidence								.																																						.																												.	.	.	.	.	.	.
Query Sequence		Q	L	P	R	V	L	.	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	V	H	D	S	V	F	I	E	D	K	N	S	P	Y	V	.	N	I	L	V	A	R	E	D	N	K	N	A	E	N	V	K	E	F	L	Q	S	Y	Q	S	P	E	V	.	.	.	.	.	.	.	A
Query Conservation								.																																						.																												.	.	.	.	.	.	.
Alig confidence								.																																						.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	L	R	K	L	D	E	Q	Q	E	F	S	A	I	I	L	A	T	A	G	L	Q	R	M	G	W	H	N	R	V	G	Q	I	L	H	P	E	E	C	M	Y	A	V	G	Q	G	A	L	G	V	E	V	R	A	K	D	Q	D	I	L	D	L	V	G	V	L	H	D	P	E	T	L	L	R	C	I	A	E	R
Template Known Secondary structure									T	S	S	S		S													T		G	G	G							T	T	T			B		T	T	T	T								T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		258	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	E	T	I	F	N	G	G	A	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	L	R	H	L	E	G	G	C	S	V	P
Template Known Secondary structure							T	T			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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