Job Description P04846 Confidence 74.05% Date Thu Jan 5 10:58:24 GMT 2012 Rank 203 Aligned Residues 158 % Identity 15% Template c3cvgC_ PDB info PDB header:metal binding protein Chain: C: PDB Molecule:putative metal binding protein; PDBTitle: crystal structure of a periplasmic putative metal binding protein Resolution 1.97 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	D	N	Q	A	H	G	Y	K	L	V	A	V	G	N	T	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	L	Q	K	E
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	I	K	H	G	I	S	E	S	P	S	Y	Y	A	F	R	D	H	F	X	L	I	G	P	P	S	N	P	A	K	L	S	G	D	S	D	I	A	D	X	F	S	K	X	H	D	A	A	E	A	G	N	T	K	P	P	V	R	F	L	S	R	Y	D	K	S	A	T	N	I	K	E	A	E	L	W	L	S	I
Template Known Secondary structure						T	T	S	S																		T	T		T	T				S	S																			S	S	S									S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		K	L	I	T	L	K	E	G	K	G	L	L	P	T	A	L	D	I	T	D	N	P	R	H	L	Q	I	M	E	L	E	G	A	Q	L	P	R	V	L	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	V	H	D	S	V	F	.	.	.	.	.	I	E	D	K	N	S	P	Y
Query Conservation																																																																					.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	V	P	W	A	T	A	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	T	W	Y	H	Q	Y	I	T	F	P	I	Q	A	L	T	A	A	I	L	L	R	E	Y	T	I	T	D	Y	G	T	Y	L	S	I	P	R	G	L	R	D	Q	X	V	I	Y	K	K	G	T	N	D	A	D	D	P	L	L	N
Template Known Secondary structure		T			T	T	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	T	T						S												T	T											T	T	S						T	T									S		T	T		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.													.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	N	I	L	V	A	R	E	D	N	K	N	A	E	N	V	K	E	F	L	Q	S	Y	Q	S	P	E	.	V	A	K	A	A	E	T	I
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		P	A	H	L	L	V	G	A	R	A	K	N	A	E	X	A	K	E	F	A	K	W	L	V	S	K	E	G	G	Q	K	V	I	E	G	F
Template Known Secondary structure									S	S		S	S	T	T										T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions