Job Description P04846 Confidence 97.44% Date Thu Jan 5 10:58:24 GMT 2012 Rank 153 Aligned Residues 214 % Identity 17% Template c2ypnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																.	.																										.	.
Query SS confidence																.	.																										.	.
Query Sequence		A	K	H	I	K	V	G	V	I	N	G	A	E	Q	.	.	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	.	.	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	V	A
Query Conservation																.	.																										.	.
Alig confidence																.	.																										.	.																							.	.
Template Conservation																																																																			.	.
Template Sequence		D	N	V	L	R	I	A	T	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M	K	D	.	.	V	P	V	E	F	P	Q	G	L	G	L	V	T
Template Known Secondary structure												S																			T	T																						T	T	S		S						G	G	G	.	.	S		S				T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	N	T	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	L	Q	K	E	K	L	I	T	L	K	E	G	K	G	L	L	P	T	A	L	D	I	T	D	N	P	R	H	L	Q	I	M	E	L	E	G	A
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	L	R	R	Q	C	Q	L	A	E	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	I	I	R	S	L	R	G	N	V	G
Template Known Secondary structure															S	S		S	S	S	T	T			T	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S							S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																									.	.	.	.	.	.	.	.	.	150	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.								.	.
Predicted Secondary structure																																													.																												.	.	.	.	.	.	.
Query SS confidence																																													.																												.	.	.	.	.	.	.
Query Sequence		Q	L	P	R	V	L	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	V	H	D	S	V	F	I	E	D	K	N	S	P	Y	V	.	N	I	L	V	A	R	E	D	N	K	N	A	E	N	V	K	E	F	L	Q	S	Y	Q	S	P	E	V	.	.	.	.	.	.	.	A	K
Query Conservation																																													.																												.	.	.	.	.	.	.
Alig confidence																																													.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	L	K	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E	L	L	A	A	L	N	H	H	E	T	A	L	R	V	T	A	E	R	A
Template Known Secondary structure									T	T	S		S												T	T		G	G	G							T	T	T	S				T	T	T	T								T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	T	I	F	N	G	G	A	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	T	R	L	E	G	G	C	Q	V	P
Template Known Secondary structure							T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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