Job Description P04846 Confidence 98.44% Date Thu Jan 5 10:58:24 GMT 2012 Rank 99 Aligned Residues 227 % Identity 12% Template c2vozA_ PDB info PDB header:metal-binding protein Chain: A: PDB Molecule:periplasmic iron-binding protein; PDBTitle: apo futa2 from synechocystis pcc6803 Resolution 1.70 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																.	.	.	.																												.	.	.
Query SS confidence																																																.	.	.	.																												.	.	.
Query Sequence		K	H	I	K	V	G	V	I	N	G	A	E	Q	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	.	.	.	.	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D	N	Q	A	H	G	Y	K	L	.	.	.
Query Conservation																																																.	.	.	.																												.	.	.
Alig confidence							.	.																									.	.	.	.	.	.										.	.	.	.																												.	.	.
Template Conservation							.	.																									.	.	.	.	.	.
Template Sequence		R	T	I	N	L	.	.	Y	S	S	R	H	Y	N	T	D	D	A	L	Y	D	A	F	G	E	V	N	L	I	E	A	.	.	.	.	.	.	S	A	E	E	L	I	E	R	I	Q	S	E	G	A	N	S	P	G	D	I	L	F	T	V	D	A	G	M	L	W	R	A	E	Q	A	G	L	F	Q	P	V	R	S
Template Known Secondary structure							.	.			S				T	T									S								.	.	.	.	.	.												T	G	G	G				S						S										T	T		B
Template Predicted Secondary structure							.	.																									.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
																								105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	G	N	T	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	L	Q	K	E	K	L	I	T	L	K	E	G	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	L	N	E	R	I	P	E	N	L	R	H	P	D	G	L	W	Y	G	F	T	Q	R	A	R	V	L	Y	Y	S	R	D	R	V	N	P	A	D	L	S	T	Y	E	A	L	A	D	P	Q	W	R	G	K	I	L	V	R	P	S	S	N	V	Y	N	L	S	L	T	A	S	R	I	A	I	H	G	E	P	E
Template Known Secondary structure								S		G	G	G	B		T	T	S	S															T	T	T			G	G	G				S	G	G	G	G	S	G	G	G	T	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.															.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	L	P	T	A	L	D	I	T	D	N	P	R	H	L	Q	I	M	E	L	E	G	A	Q	L	P	R	V	L	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	F	I	E	D	K	N	S	P	Y
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		T	R	R	W	L	Q	G	L	V	G	N	F	A	R	Q	P	E	G	.	.	.	N	D	T	A	Q	I	R	A	I	A	A	G	I	G	D	V	A	I	A	N	S	Y	Y	Y	I	R	L	Q	K	S	T	D	P	A	D	Q	E	V	V	E	K	V	S	L	F	F	P	N	T	G	S	G	E	R	G	T	H	V	N
Template Known Secondary structure												T	B	S	S	S			S	.	.	.											T	T	S		S																																	S		S	T	T	S			B
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	I	L	V	A	R	E	D	N	K	N	A	E	N	V	K	E	F	L	Q	S	Y	Q	S	P	E	V	A	K	A	A	E	T	I	F	N	G	G	A	V	P	G
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		V	S	G	A	G	V	L	K	N	A	P	N	R	D	A	A	I	A	F	L	E	Y	L	A	S	D	D	A	Q	R	Y	F	A	E	G	.	.	N	N	E	Y	P	V
Template Known Secondary structure								B	T	T		T	T												T	S											.	.	T	T				S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions