Job Description P04846 Confidence 98.05% Date Thu Jan 5 10:58:24 GMT 2012 Rank 130 Aligned Residues 204 % Identity 15% Template c2v25B_ PDB info PDB header:receptor Chain: B: PDB Molecule:major cell-binding factor; PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate Resolution 1.49 Å

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		32	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		K	H	I	K	V	G	V	I	.	.	.	.	.	.	.	.	.	.	.	.	N	G	A	E	Q	D	V	A	E	V	A	K	K	V	A	K	E	K	Y	.	.	.	G	L	D	V	E	L	V	G	F	S	G	S	L	L	P	N	D	A	T	N	H	G	E	L	D	A	N	V	F	Q	H	R	P	F	L	E	Q	D
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.										.
Template Conservation																																																					.
Template Sequence		G	Q	L	I	V	G	V	K	N	D	V	P	H	Y	A	L	L	D	Q	A	T	G	E	I	K	G	F	E	V	D	V	A	K	L	L	A	K	S	I	L	G	D	D	K	K	I	K	L	V	A	V	.	N	A	K	T	R	G	P	L	L	D	N	G	S	V	D	A	V	I	A	T	F	T	I	T	P	E	R	K
Template Known Secondary structure		T								S			T	T	T					T	T	T	T				S															S		T	T	S							.		T	T	T							T	T	S		S				S	S		B
Template Predicted Secondary structure																																																					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	A	H	G	Y	K	L	V	A	V	G	N	T	F	V	F	P	M	A	G	Y	S	K	K	I	K	T	V	A	Q	I	K	E	G	A	T	V	A	I	P	N	D	P	T	N	L	G	R	A	L	L	L	L	Q	K	E	K	L	I	T	L	K	E	G	K	G	L	L	P	T	A	L	D	I	T	D	N	P	R
Query Conservation
Alig confidence				.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	.	.	.	Y	N	F	S	E	P	Y	Y	Q	D	A	I	G	L	L	V	L	K	E	K	K	Y	K	S	L	A	D	M	K	G	A	N	I	G	V	A	Q	A	A	T	T	K	K	A	I	G	E	A	A	K	K	I	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure		T	T	.	.	.					S		S											G	G	G				S	G	G	G	G	T	T							T	T		S													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																					.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		H	L	Q	I	M	E	L	E	G	A	Q	L	P	R	V	L	D	D	P	K	V	D	V	A	I	I	S	T	T	Y	I	Q	Q	T	G	L	S	P	V	H	D	S	V	F	I	E	D	K	N	S	P	Y	V	N	I	L	V	A	R	E	D	N	K	N	A	E	N	V	K	E	F	L	Q	S	Y	.	.	Q	S	P
Query Conservation																																																																													.	.
Alig confidence																																									.	.	.																				.	.													.	.
Template Conservation																																									.	.	.																				.	.
Template Sequence		V	K	F	S	E	F	P	D	Y	P	S	I	K	A	A	L	D	A	K	R	V	D	A	F	S	V	D	K	S	I	L	L	G	Y	V	D	D	K	S	.	.	.	E	I	L	P	D	S	F	E	P	Q	S	Y	G	I	V	T	K	K	D	.	.	D	P	A	F	A	K	Y	V	D	D	F	V	K	E	H	K	N
Template Known Secondary structure								S	S										T	T	S	S	S										T	T	T			T	T		.	.	.				S				S										T	T	.	.															T
Template Predicted Secondary structure																																									.	.	.																				.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		255	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	K	A	A	E	T	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	D	A	L	A	K	K	W	G
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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