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Job DescriptionP04846
Confidence98.55%DateThu Jan 5 10:58:24 GMT 2012
Rank86Aligned Residues214
% Identity15%Templatec2ieeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:probable abc transporter extracellular-binding PDBTitle: crystal structure of yckb_bacsu from bacillus subtilis.2 northeast structural genomics consortium target sr574.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DAKHIKVGVINGAEQ. . . . . . . . . . DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQA
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Template Sequence  DKGKIVVATSGTLYPTSYHDTDKLTGYEVEVVREAAKRLGLKVEFKEX. GIDGXLTAVNSGQVDAAANDIDVTKDREEKF
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BTTTB

STTT

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STTTTSSS
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B

TT
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Query Sequence  HGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQ
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Template Sequence  AFSTPYKYSYGTAIVRKDDLSGIKTLKDLK. GKKAAGATTVYXEVARKY. . . . . . . . . . . . . . . . . . . . . . . . . GAKEVI
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S
TTTGGG
SSGGGGT.T



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Query Sequence  IMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSY. . . . QSPE
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Template Sequence  YDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYXPNKQALVXKKSNAALQKKXNEALKEXSKDGS
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   256...260.........270
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Query Sequence  VAKAAETIFNGGAVP
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Template Sequence  LTKLSKQFFNKADVS
Template Known Secondary structure  TTT

TT
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   237..240.........250.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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