Return to main results Retrieve Phyre Job Id

Job DescriptionP04846
Confidence99.65%DateThu Jan 5 10:58:24 GMT 2012
Rank24Aligned Residues216
% Identity12%Templatec2h5yC_
PDB info PDB header:metal transportChain: C: PDB Molecule:molybdate-binding periplasmic protein; PDBTitle: crystallographic structure of the molybdate-binding protein of2 xanthomonas citri at 1.7 ang resolution bound to molybdate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  HIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFV
Query Conservation   
 

                  
  
  
              
  
  
                             
Alig confidence 



.










































































Template Conservation 

 
.            
   

   

 
      
      
  
   
            
                
Template Sequence  PVTV. FAAASLKESMDEAATAYEKATGTPVRVSYAASSALARQIEQGAPADVFLSADLEWMDYLQQHGLVLPAQRHNLLG
Template Known Secondary structure 
.GGGS


TT


S
SSTTSS
GGG
Template Predicted Secondary structure  .






















Template SS confidence 















































































   4... ..10.........20.........30.........40.........50.........60.........70.........80..
 
   113..... .120.........130 .........140.........150.........160.........170.........
Predicted Secondary structure  ..........







...

























Query SS confidence 





. . . . . . . . . .











. . .
















































Query Sequence  FPMAGY. . . . . . . . . . SKKIKTVAQIKE. . . GATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQ
Query Conservation        ..........        

  ...

                 
   
                         
Alig confidence 





..........











...

























................






Template Conservation     
                    

      
          
             ................       
Template Sequence  NTLVLVAPASSKLRVDPRAPGAIAKALGENGRLAVGQTASVPAGKYAAAALRKLGQW. . . . . . . . . . . . . . . . DSVSNRL
Template Known Secondary structure 
TT





TTSTTTTTT


TTTSTT
................TS
Template Predicted Secondary structure 




























................



Template SS confidence 















































































   83......90.........100.........110.........120.........130......... 140......
 
   180.........190.........200.........210.........220.........230.........240.........250.........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  IMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKA
Query Conservation              
  
 

                                              
 

  
 
 
    
Alig confidence 






























.






























.















Template Conservation                 
         
     .         
            
 
      .
  

 



 
 
 
Template Sequence  AESESVRAALMLVSRGEAPLGIVYGSDARAD. AKVRVVATFPDDSHDAIVYPVAALKNSNNPA. TAAFVSWLGSKPAKAI
Template Known Secondary structure  SSTTSSST
.TT

GGGS


TT


TT.TS
Template Predicted Secondary structure 











.













.

Template SS confidence 















































































   147..150.........160.........170....... ..180.........190.........200........ .210.........220....
 
   260.........
Predicted Secondary structure 





Query SS confidence 









Query Sequence  AETIFNGGAV
Query Conservation 
     
  
Alig confidence 



..



Template Conservation      ..

  
Template Sequence  FARR. . GFSL
Template Known Secondary structure  T..T
Template Predicted Secondary structure 
..



Template SS confidence 









   225... .230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions