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Job DescriptionP04846
Confidence98.22%DateThu Jan 5 10:58:24 GMT 2012
Rank118Aligned Residues237
% Identity14%Templatec2gh9A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: thermus thermophilus maltotriose binding protein bound with2 maltotriose
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33... ...40.........50.........60.........70 .........80. ........90.........100
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Query Sequence  HIKV. GVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGS. . . LLPNDATNHGE. LDANVFQHRPFLEQDNQAH. . . . . . .
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Template Sequence  KITVWTHFGGPELEWLKEQARTFERTSGTKVEVVEVPFAEIKQKFILGAPQGQAADLVVTVPHDWVGEMAQAGVLEPVGK
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TTS



GGGT
S
SGGGTT
B


GG
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   101........110.........120........ .130.........140.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . GYKLVAVGNTFVFPMAGYSKKIKTVAQI. . . . . . . . KEGATVAIPNDPTNLGRAL
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Template Sequence  YVTQAYLADLQGVAVEAFTFGGRLMGLPAFAESVALIYNKKYVKEPPRTWEEFLALAQKLTTGATFGFLYNIGDPYFNFG
Template Known Secondary structure  GS
B
TTT
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TTT
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SS
SSS


TT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   148.150.........160..... ....170.........180.........190.........200.........210.
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Query Sequence  LLLQKEKLITLKEGKGLL. . . . . . . . . . . . . . . . PTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTG
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Template Sequence  FFKAFGAENVFAKDAKGNLDPTKLLIGGEVGEKALQFIKDLRFKYNLVPEGVDYGVADGAFKDGALAMILNGPWALGDYK
Template Known Secondary structure  T
SSSTTTSSSTS

S
TT

T

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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   212.......220...... ...230.........240.........250.........260.........270.
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Query Sequence  LSPVHDSVFIEDKNS. . . . . . . . . PYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPG
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Template Sequence  KAKVDFGIAPFPVPPGAKNPWGPFLGVQGVVVNAYSKNKTQAVNFAKTLVTGRNLVAFNQA. . GGRIPV
Template Known Secondary structure  TT






TT
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BTT
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   242.......250.........260.........270.........280.........290.........300.. ......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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