Job Description P0A6J1 Confidence 97.22% Date Thu Jan 5 11:03:15 GMT 2012 Rank 302 Aligned Residues 167 % Identity 13% Template c2qthA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of a gtp-binding protein from the2 hyperthermophilic archaeon sulfolobus solfataricus in3 complex with gdp Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	V	Q	Q	R	E	L	H	H	G	H	R	G	V	V	L	W	F	T	G	L	S	G	S	G	K	S	T	V	A	G	A	L	E	E	A	L	H	K	L	G	V	S	T	Y	L	L	D	G	D	N	V	R	H	G	L	C	S	D	L	G	F	S	D	A	D	R	K	E	N	I	R	R	V	G	E	V	A	N
Query Conservation
Alig confidence																																				.	.	.
Template Conservation																																				.	.	.
Template Sequence		I	N	K	L	M	K	E	L	E	S	I	K	I	I	P	S	I	G	I	V	G	Y	T	N	S	G	K	T	S	L	F	N	S	L	.	.	.	T	G	L	M	S	P	K	R	Y	A	I	P	I	N	N	R	K	I	M	L	V	D	T	V	G	F	I	R	G	I	P	P	Q	I	V	D	A	F	F	V	T	L	S
Template Known Secondary structure																							B	T	T	S	S									.	.	.		T				S								T	T											B		S	S			G	G	G
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		L	M	V	E	A	G	L	V	V	L	T	A	F	I	S	P	H	R	A	E	.	.	.	.	.	.	.	.	.	R	Q	M	V	R	E	R	V	G	E	G	R	F	I	E	V	F	V	D	T	P	L	A	I	C	E	A	R	D	P	K	G	L	Y	K	K	A	R	A	G	E	L	R	N	F	T	G	I	D	S	V
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	K	Y	S	D	A	L	I	L	V	I	D	S	T	F	S	E	N	L	L	I	E	T	L	Q	S	S	F	E	I	L	R	E	I	G	V	S	G	K	P	I	L	V	T	L	N	K	I	D	K	.	.	.	.	.	.	.	.	.	.	.	I	N	G	D	L	Y	K	K	L	D	L	V	E	K	L	S	K	E
Template Known Secondary structure		G	G	G	G	S	S								T	T	S																				T			S										G	G	G	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.												.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.		.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure															.			.
Query SS confidence															.			.
Query Sequence		Y	E	A	P	E	S	A	E	I	H	L	N	G	.	E	Q	.	L	V	T	N	L	V	Q	Q	L	L	D	L	L	R	Q
Query Conservation															.			.
Alig confidence															.			.
Template Conservation
Template Sequence		L	Y	S	P	I	F	D	V	I	P	I	S	A	L	K	R	T	N	L	E	L	L	R	D	K	I	Y	Q	L	A	T	Q
Template Known Secondary structure				S									B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions