Job Description P0A6J1 Confidence 99.63% Date Thu Jan 5 11:03:15 GMT 2012 Rank 80 Aligned Residues 169 % Identity 12% Template c2qroB_ PDB info PDB header:transferase Chain: B: PDB Molecule:deoxycytidine kinase; PDBTitle: human deoxycytidine kinase damp, udp, mg ion product complex Resolution 3.45 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	V	V	L	W	F	T	G	L	S	G	S	G	K	S	T	V	A	G	A	L	E	E	A	L	H	K	L	G	V	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	D	G	D	N	V	R	H	G	L	C	S	D	L	G	F	S	D	A	D	R	K	E	N	I	R	R	V	G	E	V	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	K	K	I	S	I	E	G	N	I	A	A	G	K	S	T	F	V	N	I	L	K	Q	L	C	E	D	W	E	V	V	P	E	P	V	A	R	W	C	N	V	Q	S	N	G	G	N	V	L	Q	M	M	Y	E	K	P	E	R	W	S	F	T	F	Q	T	Y	A	C	L	S	R	I	R	A	Q	L	A	S	L
Template Known Secondary structure												T	T	S	S										T	T		T	T							T					T	S	S																																						T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																												.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	M	V	E	A	G	L	V	V	L	T	A	F	I	S	P	H	R	A	E	R	Q	M	V	R	E	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	G	R	F	I	E	V	F	V	D	T	P	L	A	I	C	E	A	R	D	P	K	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	K	L	K	D	A	E	K	P	V	L	F	F	E	R	S	V	Y	S	D	R	Y	I	F	A	S	N	L	Y	E	S	E	C	M	N	E	T	E	W	T	I	Y	Q	D	W	H	D	W	M	N	N	Q	F	G	Q	S	L	E	L	D	G	I	I	Y	L	Q	A	T	P	E	T	C	L	H	R	I	Y	L	R
Template Known Secondary structure		T	S	G	G	G	T	S	S	S							S								T								T	T		S																			S							S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.															170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	K	K	A	R	A	G	E	L	R	N	F	T	G	I	D	S	V	Y	E	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	A	E	I	H	L	N	G	E	Q	L	V	T	N	L	V	Q	Q	L	L	D	L	L	R	Q
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	N	E	E	Q	G	I	P	L	E	Y	L	E	K	L	H	Y	K	H	E	S	W	L	L	H	R	T	L	K	T	N	F	D	Y	L	Q	E	V	P	I	L	T	L	D	V	N	E	D	F	K	D	K	Y	E	S	L	V	E	K	V	K	E
Template Known Secondary structure				G	G	G	G	S																		T	S						S		G	G	G	G	G								T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions