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Job DescriptionP0A6J1
Confidence99.77%DateThu Jan 5 11:03:15 GMT 2012
Rank23Aligned Residues169
% Identity16%Templatec2plrB_
PDB info PDB header:transferaseChain: B: PDB Molecule:probable thymidylate kinase; PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80. ........90.........
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Query Sequence  RGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDAD. . . . . . . RKENIRRVGEVANLMVEA
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Template Sequence  KGVLIAFEGIDGSGKSSQATLLKDWIELKRDVYLTESDWIHDIIKEAKKKDLLTPLTFSLIHATDFSDRYERYILPXLKS
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   100.........110.. .......120.........130.........140.........150.........160.......
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Query Sequence  GLVVLTAFISPHR. . . . . . . . . . AERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYE. .
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Template Sequence  GFIVISDRYIYTAYARDSVRGVDIDWVKKLYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGF
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   168.170.........180.........190.....
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Query Sequence  . . . . . . . . . . . . . . APESAEIHLNGEQLVTNLVQQLLDLLRQ
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Template Sequence  LKYQGLITEVYDKLVKDENFIVIDGTKTPKEIQIQIRKFVGE
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   166...170.........180.........190.........200.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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