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Job DescriptionP0A6J1
Confidence99.13%DateThu Jan 5 11:03:15 GMT 2012
Rank123Aligned Residues167
% Identity16%Templatec2gaaA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical 39.9 kda protein; PDBTitle: crystal structure of yfh7 from saccharomyces cerevisiae: a2 putative p-loop containing kinase with a circular3 permutation.
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELQIINEKYHTFLSEHPNVIEVNDRLKPMVNLVDSLKTLQPNKVAEMI
Template Known Secondary structure  TTT
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TTS


STT



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SSTTS

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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   54.....60....... ..70.........80
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KLGVSTYLLDGDNV. . . . . . RHGLCSDLGFSDA
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Template Sequence  ENQGLFKDHVEDVNFQPVKYSAEETAVVARGGTANAIRIAASINIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTF
Template Known Secondary structure  TTT

GGGTT
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TTGGGG





SGGGGB

TSSSTTTSGGGB
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   81........90..... ....100........ .110....
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Query Sequence  DRKENIRRVGEVANL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MVEAGLVVLTAFI. . . SPHRAE
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Template Sequence  DSNNFLQLCKILAKTSLKVSSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENW
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   191........200.........210.........220.........230.........240.........250.........260.........270
 
   115....120.........130.........140.........150.........160.........170. ........180.
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Query Sequence  RQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPES. . . . . . . . . AEIHLNGEQL
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Template Sequence  KKIYKTLADTGALLVYKIDIDYEATEERVAKRHLQSGLVTTIAEGREKFRSNDLLNGRDIDNHLIKVDNIVHIRND
Template Known Secondary structure  TTT


TS
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TTTSSTB


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   278.280.........290.........300.........310.........320.........330.........340.........350...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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