Job Description P0A6J1 Confidence 95.99% Date Thu Jan 5 11:03:15 GMT 2012 Rank 498 Aligned Residues 91 % Identity 18% Template c1xpuB_ PDB info PDB header:transcription/rna Chain: B: PDB Molecule:rho transcription termination factor; PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb) Resolution 3.05 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.									.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		R	G	V	V	L	W	F	T	G	L	S	G	S	G	K	S	T	V	A	G	A	L	E	E	A	L	H	K	L	G	V	S	T	Y	L	L	D	.	.	.	.	.	.	G	D	N	V	R	H	G	L	C	S	D	.	.	.	.	.	.	.	.	L	G	F	S	D	A	D	R	K	E	N	I	R	R	V	G	E	V
Query Conservation																																							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q	R	L	V	K	G	E	V	V	A	S	T	F	D	E	P	A	S	R	H	V	Q	V	A	E	M	V	I	E	K
Template Known Secondary structure		T	T									S	S	S	S																	T	T	S																						S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	L	M	V	E	A	G	L	V	V	L	T	A	F	I	S	P	H	R	A	E	R	Q	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	R	L	V	E	H	K	K	D	V	I	I	L	L	D	S	I	T	R	L	A	R	A	Y
Template Known Secondary structure								T	T										S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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