Job Description P0A6J1 Confidence 97.76% Date Thu Jan 5 11:03:15 GMT 2012 Rank 251 Aligned Residues 160 % Identity 9% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	H	G	H	R	G	V	V	L	W	F	T	G	L	S	G	S	G	K	S	T	V	A	G	A	L	E	E	A	L	H	K	L	G	V	S	T	Y	L	L	D	G	D	N	V	R	H	G	L	C	S	D	L	G	F	S	D	A	.	D	R	K	E	N	I	R	R	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.											.	.	.																																						.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.											.	.	.
Template Sequence		V	H	Y	A	R	P	.	.	I	I	I	L	G	P	T	K	D	R	.	.	.	A	N	D	D	L	L	S	E	F	P	D	K	F	G	S	C	V	P	H	T	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	Q	A	H	K	F	I	E	A	G	Q	Y	N
Template Known Secondary structure				S				.	.					S	T	T				.	.	.										T	T	T										S				T	T			B	T	T	T	B				S											T	T									T
Template Predicted Secondary structure								.	.											.	.	.
Template SS confidence
		531	.	.	.	.	.			.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	E	V	A	N	L	M	V	E	A	G	L	V	V	L	T	A	F	I	S	P	H	R	A	E	R	Q	M	V	R	E	R	V	G	E	G	R	F	I	E	V	F	V	D	T	P	L	A	I	C	E	A	R	D	P	K	G	L	Y	K	K	A	R	A	G	E	L	R	N	F	T	G	I
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		S	H	L	Y	G	T	S	V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	.	.	.	.	.	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	N	K	R	I	T	E	E	Q	A	R	K	A	F	D	R	A	T	K	L
Template Known Secondary structure		T																T	T									T	T						.	.	.	.	.			T	T											S	S									T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.						.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	V	Y	E	A	P	E	S	A	E	I	H	L	N	G	E	Q	L	V	T	N	L	V	Q	Q	L	L	D	L	L	R	Q
Query Conservation
Alig confidence						.	.												.
Template Conservation						.	.												.
Template Sequence		E	Q	E	F	.	.	T	E	C	F	S	A	I	V	E	G	D	.	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D
Template Known Secondary structure						.	.	G	G	G		S						S	.	S
Template Predicted Secondary structure						.	.												.
Template SS confidence
		681	.	.	.			.	.	.	.	.	690	.	.	.	.	.		.	.	.	.	700	.	.	.	.	.	.	.	.	.	710

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions