Job Description P0AA37 Confidence 100.00% Date Thu Jan 5 11:11:49 GMT 2012 Rank 10 Aligned Residues 148 % Identity 14% Template c3dh3C_ PDB info PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate Resolution 3.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	Y	Q	D	D	H	I	M	V	V	N	K	P	S	G	L	L	S	V	P	G	R	L	E	E	H	K	D	S	V	M	T	R	I	Q	R	D	Y	P	Q	A	E	S	V	H	R	L	D	M	A	T	S	G	V	I	V	V	A	L	T	K	A	A	E	R	E	L	K	R	Q	F	R	E	R	E	P	K	K
Query Conservation
Alig confidence																															.	.	.																																						.	.
Template Conservation																															.	.	.																																						.	.
Template Sequence		P	R	E	A	E	D	L	V	L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	.	.	.	I	V	D	F	V	N	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	.	.	L	R	A	G	N	D	H	E	K
Template Known Secondary structure					G	G	G										T	T		B					S	S		T	T	B	.	.	.						T		S	S					S	S				T	T									S		T							.	.			G	G	G
Template Predicted Secondary structure																															.	.	.																																						.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	V	A	R	V	W	G	H	P	S	P	A	E	G	L	V	D	L	P	L	I	C	D	W	P	N	R	P	K	Q	K	V	C	Y	E	T	G	K	P	A	Q	T	E	Y	E	V	V	E	Y	A	A	D	N	T	A	R	V	V	L	K	P	I	T	G	R	S	H	Q	L	R	V	H	M	L	A	L	G	H	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	L	V	T	V	D	K	P	I	T	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	R	G	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	E
Template Known Secondary structure								S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T			B		S	S	S	B										S	S	S							S				T	T									T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		175	.	.	.			.	180	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		I	L	G	D	.	.	R	F	Y	A	S
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		V	K	K	L	E	R	T	R	I	M	N
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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