Job Description P0AA37 Confidence 100.00% Date Thu Jan 5 11:11:49 GMT 2012 Rank 6 Aligned Residues 163 % Identity 18% Template c1vioA_ PDB info PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridylate synthase Resolution 1.59 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	W	L	V	I	L	Y	Q	D	D	H	I	M	V	V	N	K	P	S	G	L	L	S	V	P	G	R	L	E	E	H	K	D	S	V	M	T	R	I	Q	R	D	Y	P	Q	A	E	S	V	H	R	L	D	M	A	T	S	G	V	I	V	V	A	L	T	K	A	A	E	R	E	L	K	R	Q	F	R	E	R
Query Conservation
Alig confidence																																													.	.	.																												.	.
Template Conservation																																													.	.	.																												.	.
Template Sequence		E	D	E	L	L	T	W	I	E	E	G	Q	Y	F	M	L	N	K	P	Q	G	C	V	C	S	N	D	D	Y	P	T	I	Y	Q	F	F	D	Y	P	L	A	G	K	.	.	.	L	H	S	A	G	R	L	D	V	D	T	T	G	L	V	L	L	T	D	D	G	Q	W	S	H	R	I	.	.	T	S	P	K	H
Template Known Secondary structure		T	T					S	S												T	T		B	S	S						B	G	G	G	G	S		T	T	G	G	G	G	.	.	.				S	S				T	T									S									.	.			T	T	S
Template Predicted Secondary structure																																													.	.	.																												.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	K	K	Q	Y	V	A	R	V	W	G	H	P	S	P	A	E	G	L	V	D	L	P	L	I	C	D	W	P	N	R	P	K	Q	K	V	C	Y	E	T	G	K	P	A	Q	T	E	Y	E	V	V	E	Y	A	A	D	N	T	A	R	V	V	L	K	P	I	T	G	R	S	H	Q	L	R	V	H	M	L	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		H	C	E	K	T	Y	L	V	T	L	A	D	P	V	E	E	N	Y	S	A	.	.	.	.	.	.	.	.	.	.	.	.	A	C	A	E	G	I	L	L	R	G	E	K	E	P	T	K	P	A	K	L	E	I	L	D	D	.	.	Y	N	V	N	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A
Template Known Secondary structure												S	S				T	T				.	.	.	.	.	.	.	.	.	.	.	.									T	T		S	S											S	S	.	.	S							S				T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.													.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		171	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	G	H	P	I	L	G	D	R	.	.	F	Y	A	S	P	E	A	R	A	M	A	P	R
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		L	G	N	K	V	V	G	L	H	R	W	K	I	G	D	V	V	L	D	E	S	L	E	E
Template Known Secondary structure		T	T												T	T					T	T			T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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