Job Description P0AA37 Confidence 97.23% Date Thu Jan 5 11:11:49 GMT 2012 Rank 23 Aligned Residues 69 % Identity 28% Template c1sgvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub) Resolution 1.90 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		D	D	H	I	M	V	V	N	K	P	S	G	L	L	S	V	P	G	R	L	E	E	H	K	D	S	V	M	T	R	I	Q	R	D	Y	P	.	.	Q	A	E	S	V	H	R	L	D	M	A	T	S	G	V	I	V	V	A	L	T	K	A	A	E	R	E	L	K	R	Q	F	R	E	R	E	P	K	K	Q	Y	V
Query Conservation																																						.	.
Alig confidence																		.	.	.	.	.	.	.	.	.												.	.																							.	.													.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																																				.	.													.	.
Template Sequence		G	P	G	I	V	V	I	D	K	P	A	G	M	T	S	H	.	.	.	.	.	.	.	.	.	D	V	V	G	R	C	R	R	I	F	A	T	R	R	V	G	H	A	G	T	L	D	P	M	A	T	G	V	L	V	I	G	I	E	R	.	.	A	T	K	I	L	G	L	L	T	A	A	P	.	.	K	S	Y	A
Template Known Secondary structure			S									T	T					.	.	.	.	.	.	.	.	.										T	T		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	T	T	T	S		.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																																				.	.													.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.
		98	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions