Job Description P75718 Confidence 90.54% Date Thu Jan 5 12:13:28 GMT 2012 Rank 53 Aligned Residues 79 % Identity 14% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		A	I	I	H	Y	L	G	T	H	K	S	F	C	A	Q	D	V	A	A	V	T	.	.	.	.	G	A	T	V	T	S	I	N	Q	A	A	A	K	M	A	R	A	G	I	L	V	V	D	G	K	V	W	R	T	V	Y	Y	R	F	A	T	R	E	E	W	E	G	K	V	S	T	N	L	I	F	K	E	C	R	Q
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		E	V	M	N	I	I	W	M	K	K	Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G
Template Known Secondary structure											S	S																																T	S							T	T							S	S																		S	T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions