Job Description P75718 Confidence 81.80% Date Thu Jan 5 12:13:28 GMT 2012 Rank 114 Aligned Residues 83 % Identity 11% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		A	I	I	H	Y	L	G	T	H	K	S	.	F	C	A	Q	D	V	A	A	V	T	G	A	T	V	T	S	I	N	Q	A	A	A	K	M	A	R	A	G	I	L	V	V	D	G	K	V	W	R	T	V	Y	Y	R	F	A	T	R	E	E	W	E	G	K	V	S	T	N	L	I	F	K	E	C	R	Q	S	A	A
Query Conservation													.
Alig confidence													.																																							.	.	.																								.	.
Template Conservation																																																				.	.	.																								.	.
Template Sequence		S	I	M	R	A	L	G	S	H	P	H	G	L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	N	A	L	E	E	E	F	L	V	E	A	L	G	P	A	G	G	.	.	.	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	D	I	L	S	L	V	K	.	.	P	Y
Template Known Secondary structure											T	T		B									S	S															T	T	T	S					S	S	S	S		.	.	.					T								T	T	T	T	T							.	.
Template Predicted Secondary structure																																																				.	.	.																								.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.
		85	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	R	V	L	R	V	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	S	L	A	E	E	L	D
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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