 |
Job Description | P75857 | Confidence | 26.96% | Date | Thu Jan 5 12:15:06 GMT 2012 |
Rank | 60 | Aligned Residues | 44 |
% Identity | 14% | Template | c2op6A_ |
PDB info |
PDB header:peptide binding protein | Chain: A: PDB Molecule:heat shock 70 kda protein d; |
PDBTitle: peptide-binding domain of heat shock 70 kda protein d precursor from2 c.elegans
|
Resolution | 1.85 Å |
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | |
330 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
K | S | N | A | Q | I | T | I | K | Q | N | G | Y | T | I | Y | Q | T | Y | V | S | P | G | A | F | E | I | S | D | L | Y | S | T | S | S | S | G | . |
D | L | L | V | E | I | K |
Query Conservation |   |
  |
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |
|   |
| . |
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
Template Sequence |   |
Q | S | A | V | S | I | V | I | Y | E | G | E | R | P | M | V | M | D | N | H | K | L | G | N | F | D | V | T | G | I | P | P | A | P | R | G | V | P | Q | I | E | V | T | F | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  | S | S |
| S | B | G | G | G | S |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| T | T |
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|