 |
Job Description | P76389 | Confidence | 99.79% | Date | Thu Jan 5 12:22:30 GMT 2012 |
Rank | 26 | Aligned Residues | 125 |
% Identity | 22% | Template | d2nyca1 |
SCOP info | CBS-domain pair
| CBS-domain pair
| CBS-domain pair
|
Resolution | 1.90 |
|
 |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | |
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | |
. |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
| . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
N | L | N | Q | R | T | V | S | S | I | . |
M | T | S | R | H | D | I | E | H | I | D | L | N | A | P | E | E | E | I | R | Q | L | L | E | R | N | Q | H | T | R | L | V | V | T | D | G | D | D | A | E | D | L | L | G | V | V | H | V | I | D | L | L | Q | Q | S | L | R | G | E | P | L | N | L | R | V | L | I | . |
R |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |
| . |
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
H | F | L | K | I | P | I | G | D | L | N | I | I | T | Q | D | N | M | K | S | C | Q | M | T | T | P | V | I | D | V | I | Q | M | L | T | Q | G | R | V | S | S | V | P | I | I | D | E | N | G | Y | . |
. |
L | I | N | V | Y | E | A | Y | D | V | L | G | L | I | K | G | G | L | S | L | S | V | G | E | A | L | M | R |
Template Known Secondary structure |   |
G | G | G | G | S | B | G | G | G | S | S |
|
| B |
| S | S |
|
|
| B |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
| T | T |
| B | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| S | B |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
  |   |
374 | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | L | V | F | P | E | T | L | P | L | L | P | A | L | E | Q | F | R | N | A | R | T | H | F | A | F | V | V | D | E | F | G | S | V | E | G | I | V | T | L | S | D | V | T | E | T | I | A |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |
|
|
|
|   |   |
|
|
|   |   |
|
|
Template Sequence |   |
R | S | Y | T | C | T | K | N | D | K | L | S | T | I | M | D | N | I | R | K | A | R | V | H | R | F | F | V | V | D | D | V | G | R | L | V | G | V | L | T | L | S | D | I | L | K | Y | I | L |
Template Known Secondary structure |   |
|
|
|  |  |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|