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Job DescriptionP76389
Confidence99.43%DateThu Jan 5 12:22:30 GMT 2012
Rank75Aligned Residues115
% Identity22%Templatec3kh5A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:protein mj1225; PDBTitle: crystal structure of protein mj1225 from methanocaldococcus2 jannaschii, a putative archaeal homolog of g-ampk.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330.........340.........350.........360.....
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Query Sequence  MTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEP. . . . . . . . . . . . . . . . . . . .
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Template Sequence  IAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGN. NKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPV
Template Known Secondary structure  TS

S



B
TTSB



TTT.
BTTTSGGGTTSTT
TTSBG
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   8.10.........20.........30.........40..... ....50.........60.........70.........80......
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
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Template Sequence  REIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGER
Template Known Secondary structure  GGTSB
S


TT
BTT
S
TT
BGGGS
TT
BSGGG
B
S


B
TT
B
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   366...370.. .......380........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LNLRVLI. RQPLVFPETLPLLPAL
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Template Sequence  LKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIA
Template Known Secondary structure  T
STTTSS

T
BSBSS


B
TT
B
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   389390.........400.........410.........420.
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Query Sequence  EQFRNARTHFAFVVDEFGSVEGIVTLSDVTETI
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Template Sequence  EIMVTNDIGALPVVDENLRIKGIITEKDVLKYF
Template Known Secondary structure  T


TT
BGGGG
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   247..250.........260.........270.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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