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Job DescriptionP77650
Confidence99.64%DateThu Jan 5 12:31:22 GMT 2012
Rank128Aligned Residues238
% Identity18%Templated1neka2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVT
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Template Sequence  VREFDAVVIGAGGAGMRAALQISQSGQ. . TCALLSKVFPTRSHTV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S


STT
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   5....10.........20.........30. ........40.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  IKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIIGAGTIGLELA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAI
Template Known Secondary structure  ...............................G

S




SSS


TS
S
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   48.50.........60.........70.........80.........90......
 
   161........170.........180..... ....190.........200.........210......
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Query Sequence  ASATQRRCKVTVIELAATVMGRNAP. . . . . . . . . . . . . . . . . . . . . PPVQRYLLQRHQQAGVRILLNNAIEHVVDGE. . .
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Template Sequence  LELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGA
Template Known Secondary structure  TT



B
S
BTTB


SSB

TTSSS

TT
TT

S
TTS
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   217..220...... ...230........ .240.........250...... ...260....
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Query Sequence  . . . KVELTLQSGE. . TLQADVVIYGIG. . . . . . . . . . . . . . . . . . . . . . . . . . ISANEQLAREANLDTANG. IVIDEACR
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Template Sequence  VVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMMGGIPTKVTGQALTVNEKGE
Template Known Secondary structure  TTT

S





GGGSSS
SS
TT
S
TTT


B



BB
TT

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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   265....270.........280.........290.........300......
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Query Sequence  . TCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQIAAAAM
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Template Sequence  DVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHL
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SSS
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TT
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   377..380.........390.........400.........410.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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