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Job DescriptionP77650
Confidence99.65%DateThu Jan 5 12:31:22 GMT 2012
Rank127Aligned Residues259
% Identity15%Templated1jnra2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.... .....30.........40.........50.....
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Query Sequence  EKTIIIVGGGQAAAMAAASLRQ. . . . QGFTGELHLFSDERHLPYERPPLSKSMLLED. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ETDILIIGGGFSGCGAAYEAAYWAKLGGL. . KVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD
Template Known Secondary structure 
S

STTTT
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SS
TTT
STTTT
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SSSSBS



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   22.......30.........40.........50 .........60.........70.........80.........90.........
 
   56...60.........70.........80.........90.........100.........110.........120....
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Query Sequence  . . . . . . . . . . . SPQLQQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALGER
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Template Sequence  MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFEL
Template Known Secondary structure  TTT


TT

B
B
TTS
B
BSSSS
TT
GGG
S
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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  CFTLRHAGDAARLREVLQPERSVVIIGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRIL
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Template Sequence  LKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKA. . . . . . . . .
Template Known Secondary structure 
TT
TTBSSSS

S



B
SSS

S

SGGGG

SS
TT
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   180.........190.........200.........210.........220.........230.........240.........250
 
   205....210.........220.........230.........240.........250.........260.........270.........280....
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Query Sequence  LNNAIEHVVDGEKVELTLQSGETLQADVVIYGIGISANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDVAITRLDNG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . GAMLTQAGFWVC. GPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHK.
Template Known Secondary structure  ..........................T






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TTT

TT
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TTB
SSBT
GGGB
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   251........260.. .......270.........280.........290.........300..
 
   285....290.........300......
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Query Sequence  ALHRCESWENANNQAQIAAAAM
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Template Sequence  . . . . . . FSSGSFTEGRIAAKAA
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   448.450.........460...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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