Job Description P77650 Confidence 99.37% Date Thu Jan 5 12:31:22 GMT 2012 Rank 172 Aligned Residues 249 % Identity 13% Template c3rhaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putrescine oxidase; PDBTitle: the crystal structure of oxidoreductase from arthrobacter aurescens Resolution 2.05 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure					.	.																																																	.	.	.	.
Query SS confidence					.	.																																																	.	.	.	.
Query Sequence		M	K	E	.	.	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	K	S	M	.	.	.	.	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H
Query Conservation					.	.																																																	.	.	.	.
Alig confidence					.	.																									.	.																							.	.	.	.
Template Conservation																															.	.
Template Sequence		M	Q	N	L	D	R	D	V	V	I	V	G	A	G	P	S	G	L	T	A	A	R	E	L	K	K	A	G	L	.	.	S	V	A	V	L	E	A	R	D	R	V	G	G	R	T	W	T	D	T	I	D	G	A	M	L	E	I	G	G	Q	W	V	S	P	D	Q	T	V	L	M	E	L	L	D	E	L	G	L	K
Template Known Secondary structure								S							S													T	T		.	.							S	S	S	S	S		T	T							T	T						S						T	T												T
Template Predicted Secondary structure																															.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	S	.	.	.	G	V	T	I	K	T	L	G	R	D	T	R	E	L	V	L	T	N	G	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G
Query Conservation					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Y	S	R	Y	R	D	G	E	S	V	Y	I	G	A	D	G	K	R	T	Q	Y	T	G	D	T	F	P	V	N	E	T	T	K	A	E	M	D	K	L	V	A	I	L	D	E	L	A	A	E	I	G	P	T	E	P	W	A	H	P	K	A	R	E	L	D	T	I	S	F	H	H	W	L	R	Q	N	S	N	D
Template Known Secondary structure									S							T	T								S	S	S		S																									S	S		G	G	G	S	T	T						S	S	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A	G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	A	C	N	N	I	G	L	F	I	A	G	G	M	L	T	K	P	A	H	A	F	S	A	L	Q	A	V	L	M	A	A	S	A	G	S	F	S	H	L	T	D	E	D	F	I	L	D	K	R	V	I	G	G	M	Q	Q	V	S	L	L	Q	A	A	E	L	G	D	D	V	V	L	N	S	P	V	R	T	I
Template Known Secondary structure																			S		T	T	S	S	B											T	T												T					T	T		T	T											G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	G	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	A	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	W	D	E	N	G	V	S	V	V	S	E	R	A	T	V	N	A	R	F	V	I	M	A	V	P	P	N	L	Y	S	R	V	S	F	D	P	P	L
Template Known Secondary structure					T	T							S	S						S						S		G	G	G	G	G	G	S				S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions